Genomics · Transcriptomics · Epigenomics · Multi-omics

Bioinformatics & Data Solutions

Purpose-built analysis for every stage of your sequencing project — from assay design to data analysis, visualization, and storage — without losing sight of the biology.

Accelerate your research

End-to-end bioinformatics, tailored to your project

Our bioinformatics professional services support every stage of your next-generation sequencing workflow: assay design, data monitoring, visualization, analysis, and storage.

Flexible offerings include expert bioinformatics and IT consulting, training, and data analysis, combining current methods with a client-driven approach.

Analysis services

Custom analysis across the omics

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DNA

Whole genome & exome

Identify genes, regulatory elements, and variation across individuals or populations.

  • De novo genome assembly
  • SNP, indel, and structural variant discovery
  • CNV and gene-fusion analysis
  • Exome analysis and family trio analysis
  • ChIP-seq peak analysis
  • Pathogenicity scoring, phenotype relationships, and annotated reports
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Epigenome

Epigenomics

Map DNA methylation and other epigenetic marks that shape gene regulation, health, and disease.

  • Methylation profiling and differentially methylated CpGs
  • Functional location mapping
  • Annotated peak calling and visualization
  • Motif discovery
  • Small RNA expression profiles and categories
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RNA

Transcriptomics (RNA-seq)

Quantify expression, detect splicing and novel transcripts, and uncover regulatory networks.

  • Differential gene expression
  • Splice variant and novel isoform analysis
  • Small RNA and miRNA analysis
  • De novo transcriptome assembly
  • Variant discovery and fusion gene identification
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Microbiome

Metagenomics

Characterize bacterial, viral, fungal, and archaeal communities in human and environmental samples.

  • 16S rRNA metagenomics
  • Whole genome (shotgun) metagenomics
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Protein

Proteomics

Analyze protein expression, structure, domains, and interactions to find therapeutic targets.

  • Statistical analysis and visualization
  • Normalized protein expression
  • Absolute protein quantitation
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Pathways

Pathway & differential expression

Find the pathways and processes that change between conditions, using GO, KEGG, and STRING.

  • Enriched pathway analysis
  • Proteins with known functions and enrichment p-values
  • Molecular function analysis
  • Protein interaction mapping

Data deliverables

Choose the level of output you need

For sequencing run in our laboratory, choose how far we take the analysis.

1

Wet lab only

Raw BCL and FASTQ files.

2

Wet lab & QC

Aligned BAM files with standard quality reports.

3

Variant reporting

Variant calls in VCF and gVCF formats.

4

Full reports

Curated genomic interpretation reports and custom annotation options.

Targeted panel generation

Have specific targets in mind? We design and build panels across a wide range of sizes, target regions, and multiplexing requirements — including non-human panels for most genomes — and can expand the content of most existing panels.

Not on our list?

With over 15 years of custom development experience, we can take on your custom analysis.

Turn your data into answers.

Tell us about your data type, your question, and your timeline.